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  • Top cofit genes for Psyr_4295 from Pseudomonas syringae pv. syringae B728a

    Histone deacetylase superfamily
    SEED: Deacetylases, including yeast histone deacetylase and acetoin utilization protein

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_0959 Short-chain dehydrogenase/reductase SDR 0.31 0.39
    2 Psyr_3310 transferase hexapeptide repeat protein no 0.39
    3 Psyr_2288 outer membrane transport energization protein ExbB no 0.39
    4 Psyr_0467 Protein of unknown function UPF0153 no 0.37
    5 Psyr_3297 CheW protein no 0.37
    6 Psyr_1515 hypothetical protein no 0.36
    7 Psyr_4903 hypothetical protein no 0.36
    8 Psyr_1004 nucleoside ABC transporter membrane protein no 0.36
    9 Psyr_4723 hypothetical protein no 0.35
    10 Psyr_4934 Aminoglycoside phosphotransferase:Aminotransferase class-III no 0.35
    11 Psyr_1505 Protein of unknown function DUF156 no 0.34
    12 Psyr_0475 Protein of unknown function YGGT 0.27 0.34
    13 Psyr_2880 conserved hypothetical protein no 0.34
    14 Psyr_2188 Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer:CHASE3 no 0.34
    15 Psyr_3418 PilT protein, N-terminal no 0.33
    16 Psyr_3851 conserved hypothetical protein 0.48 0.33
    17 Psyr_0574 protease FtsH subunit HflK 0.35 0.33
    18 Psyr_4381 arginine decarboxylase no 0.33
    19 Psyr_0172 Protein of unknown function DUF785 no 0.32
    20 Psyr_4836 N-formylglutamate deformylase 0.80 0.32

    Or look for negative cofitness