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  • Top cofit genes for Psyr_4269 from Pseudomonas syringae pv. syringae B728a

    type III effector HopAE1
    SEED: FIG00954449: hypothetical protein

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_3126 transporter, putative no 0.46
    2 Psyr_0754 Levansucrase no 0.39
    3 Psyr_0786 CheW-like protein:ATP-binding region, ATPase-like:Signal transducing histidine kinase, homodimeric:Hpt no 0.38
    4 Psyr_4907 PAS no 0.37
    5 Psyr_0929 Glycosyl transferase, family 2 no 0.37
    6 Psyr_1737 carbohydrate ABC transporter ATP-binding protein, CUT1 family no 0.36
    7 Psyr_2314 pyruvate dehydrogenase (cytochrome) no 0.36
    8 Psyr_0095 transposase, IS4 family no 0.35
    9 Psyr_1941 ATP-binding region, ATPase-like:Histidine kinase no 0.34
    10 Psyr_0784 CheW-like protein no 0.34
    11 Psyr_0473 Methionine biosynthesis MetW no 0.34
    12 Psyr_1721 moxR protein, putative no 0.34
    13 Psyr_1064 Protein of unknown function DUF328 no 0.33
    14 Psyr_0015 Oxidoreductase alpha (molybdopterin) subunit no 0.33
    15 Psyr_2728 vanillin synthase / trans-feruloyl-CoA hydratase no 0.33
    16 Psyr_4441 heat shock protein YegD no 0.33
    17 Psyr_1662 tRNA pseudouridine synthase no 0.33
    18 Psyr_4222 Protein of unknown function DUF81 no 0.33
    19 Psyr_2209 ABC transporter, substrate-binding protein, aliphatic sulfonate no 0.33
    20 Psyr_4121 transcriptional regulator, AraC family with amidase-like domain protein no 0.32

    Or look for negative cofitness