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  • Top cofit genes for Psyr_4239 from Pseudomonas syringae pv. syringae B728a

    Binding-protein-dependent transport systems inner membrane component
    SEED: Dipeptide transport system permease protein DppB (TC 3.A.1.5.2)
    KEGG: dipeptide transport system permease protein

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_1401 Histidine triad (HIT) protein 0.62 0.60
    2 Psyr_1055 Membrane bound O-acyl transferase, MBOAT 0.55 0.57
    3 Psyr_0915 NAD-dependent epimerase/dehydratase 0.55 0.55
    4 Psyr_0758 beta-fructofuranosidase 0.66 0.54
    5 Psyr_0378 Glycosyl transferase, family 2 0.91 0.53
    6 Psyr_0223 extracellular solute-binding protein, family 5 0.80 0.52
    7 Psyr_1705 Amino acid adenylation 0.55 0.52
    8 Psyr_0219 phosphomannomutase 0.93 0.51
    9 Psyr_1059 alginate export porin 0.20 0.51
    10 Psyr_4242 Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal 0.90 0.51
    11 Psyr_1189 SLT:MLTD_N no 0.51
    12 Psyr_0377 Periplasmic glucan biosynthesis protein, MdoG 0.31 0.50
    13 Psyr_2993 maltooligosyl trehalose hydrolase 0.20 0.50
    14 Psyr_1054 alginate biosynthesis protein AlgJ 0.53 0.50
    15 Psyr_0508 lyase, putative no 0.50
    16 Psyr_2613 Cyclic peptide transporter 0.56 0.50
    17 Psyr_1395 virulence 0.64 0.49
    18 Psyr_1053 alginate biosynthesis protein AlgF 0.27 0.49
    19 Psyr_4692 ABC transporter no 0.49
    20 Psyr_1218 type III helper protein HrpK1 0.53 0.48

    Or look for negative cofitness