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  • Top cofit genes for Psyr_4237 from Pseudomonas syringae pv. syringae B728a

    outer membrane porin
    SEED: Outer membrane porin, OprD family

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_3324 transcriptional regulator, TetR family 0.66 0.46
    2 Psyr_1476 Secreted repeat of unknown function no 0.45
    3 Psyr_1074 amino acid ABC transporter membrane protein 2, PAAT family no 0.43
    4 Psyr_1130 conserved hypothetical protein no 0.43
    5 Psyr_3834 AMP-dependent synthetase and ligase no 0.42
    6 Psyr_0843 TPR repeat protein no 0.41
    7 Psyr_4006 transcriptional regulator, TetR family no 0.40
    8 Psyr_1960 Non-ribosomal peptide synthase:Amino acid adenylation no 0.39
    9 Psyr_1258 Peptidase M23B no 0.39
    10 Psyr_0502 potassium/proton antiporter, CPA1 family 0.34 0.38
    11 Psyr_1749 ATP-dependent proteinase, Serine peptidase, MEROPS family S16 no 0.37
    12 Psyr_4334 conserved hypothetical protein no 0.37
    13 Psyr_2442 precorrin-6A synthase (deacetylating) 0.20 0.37
    14 Psyr_1323 Extensin-like, C-terminal no 0.37
    15 Psyr_3291 hypothetical protein no 0.37
    16 Psyr_4866 Aminotransferase class-III 0.26 0.37
    17 Psyr_0817 N-acetylmuramoyl-L-alanine amidase, family 2 0.13 0.36
    18 Psyr_0346 Acriflavin resistance protein 0.49 0.36
    19 Psyr_2337 conserved hypothetical protein 0.21 0.36
    20 Psyr_4271 Cobalamin synthesis protein/P47K:Cobalamin synthesis protein/P47K no 0.36

    Or look for negative cofitness