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  • Top cofit genes for Psyr_4227 from Pseudomonas syringae pv. syringae B728a

    Dihydrodipicolinate synthetase
    SEED: 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41)
    KEGG: 5-dehydro-4-deoxyglucarate dehydratase

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_4271 Cobalamin synthesis protein/P47K:Cobalamin synthesis protein/P47K 0.40 0.48
    2 Psyr_0282 Binding-protein-dependent transport systems inner membrane component 0.55 0.47
    3 Psyr_2773 hypothetical protein no 0.43
    4 Psyr_2798 hypothetical protein no 0.42
    5 Psyr_3054 Choline/ethanolamine kinase:Aminoglycoside phosphotransferase no 0.41
    6 Psyr_1314 lipoprotein, putative 0.57 0.41
    7 Psyr_0406 Pilus assembly protein, PilQ no 0.41
    8 Psyr_2794 Protein of unknown function DUF264 no 0.41
    9 Psyr_2771 conserved domain protein no 0.41
    10 Psyr_3131 Secretion protein HlyD no 0.40
    11 Psyr_0775 monosaccharide ABC transporter ATP-binding protein, CUT2 family 0.42 0.40
    12 Psyr_1862 Zinc transporter ZIP no 0.40
    13 Psyr_2652 hypothetical protein no 0.39
    14 Psyr_4738 conserved hypothetical protein no 0.38
    15 Psyr_0241 conserved hypothetical protein 0.34 0.38
    16 Psyr_1442 conserved hypothetical protein no 0.38
    17 Psyr_1980 Heat shock protein Hsp20 no 0.37
    18 Psyr_3526 transcriptional regulator, LysR family no 0.37
    19 Psyr_2584 IucA/IucC no 0.37
    20 Psyr_2772 Fibronectin, type III no 0.37

    Or look for negative cofitness