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  • Top cofit genes for Psyr_4219 from Pseudomonas syringae pv. syringae B728a

    GAF
    SEED: GAF domain protein

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_0026 Sulfate transporter/antisigma-factor antagonist STAS:Sulphate transporter no 0.56
    2 Psyr_4667 Tryptophan 2-monooxygenase no 0.50
    3 Psyr_0336 Outer membrane autotransporter barrel no 0.49
    4 Psyr_2632 virulence protein SrfB no 0.47
    5 Psyr_2848 hypothetical protein no 0.46
    6 Psyr_4324 serine O-acetyltransferase no 0.45
    7 Psyr_4279 16S rRNA m(2)G 1207 methyltransferase / 23S rRNA m(2)G-1835 methyltransferase no 0.44
    8 Psyr_1934 conserved hypothetical protein no 0.44
    9 Psyr_4958 AAA ATPase, central region:Clp, N terminal:Clp, N terminal no 0.43
    10 Psyr_1474 hypothetical protein no 0.42
    11 Psyr_1514 type II secretion system protein E no 0.41
    12 Psyr_4650 CDS no 0.41
    13 Psyr_0575 protease FtsH subunit HflC no 0.41
    14 Psyr_1670 Short-chain dehydrogenase/reductase SDR no 0.41
    15 Psyr_5055 YeeE/YedE no 0.41
    16 Psyr_4173 Protein of unknown function DUF748 no 0.40
    17 Psyr_3336 transcriptional regulator, LacI family no 0.40
    18 Psyr_1975 Integrase, catalytic region no 0.40
    19 Psyr_4696 transcriptional regulator, LacI family no 0.38
    20 Psyr_1931 hypothetical protein no 0.38

    Or look for negative cofitness