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  • Top cofit genes for Psyr_4213 from Pseudomonas syringae pv. syringae B728a

    Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal
    SEED: Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1)
    KEGG: peptide/nickel transport system ATP-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_3055 Aminoglycoside phosphotransferase no 0.46
    2 Psyr_0161 Protein of unknown function DUF861 no 0.46
    3 Psyr_1528 Arc-like DNA binding protein no 0.45
    4 Psyr_3521 transcriptional regulator, LysR family 0.33 0.45
    5 Psyr_2741 Beta-lactamase no 0.42
    6 Psyr_1753 conserved hypothetical protein no 0.42
    7 Psyr_2222 aminomethyltransferase no 0.40
    8 Psyr_0756 indole-3-glycerol phosphate synthase no 0.39
    9 Psyr_2529 Amidohydrolase no 0.39
    10 Psyr_3111 transcriptional regulator, LysR family no 0.39
    11 Psyr_2218 Beta-lactamase-like protein no 0.38
    12 Psyr_0037 Protein of unknown function DUF1458 no 0.38
    13 Psyr_4386 conserved hypothetical protein no 0.38
    14 Psyr_2487 Short-chain dehydrogenase/reductase SDR no 0.38
    15 Psyr_2172 conserved hypothetical protein no 0.38
    16 Psyr_4952 hypothetical protein no 0.38
    17 Psyr_3241 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region:D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein no 0.38
    18 Psyr_4355 hypothetical protein no 0.38
    19 Psyr_2589 IucA/IucC no 0.37
    20 Psyr_1822 MscS Mechanosensitive ion channel 0.38 0.37

    Or look for negative cofitness