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  • Top cofit genes for Psyr_4172 from Pseudomonas syringae pv. syringae B728a

    conserved hypothetical protein
    SEED: Methyltransferase (EC 2.1.1.-)
    KEGG: ribosomal RNA large subunit methyltransferase I

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_3419 4Fe-4S ferredoxin, iron-sulfur binding protein no 0.43
    2 Psyr_4826 TonB-dependent receptor:TonB box, N-terminal no 0.43
    3 Psyr_4519 General substrate transporter:Major facilitator superfamily 0.44 0.41
    4 Psyr_3097 Peptidase U32 no 0.40
    5 Psyr_0246 aminomethyltransferase no 0.40
    6 Psyr_2341 conserved hypothetical protein no 0.40
    7 Psyr_2668 Helix-turn-helix, Fis-type no 0.37
    8 Psyr_3098 GCN5-related N-acetyltransferase no 0.36
    9 Psyr_4908 conserved hypothetical protein no 0.36
    10 Psyr_0835 transcriptional regulator, TraR/DksA family no 0.36
    11 Psyr_0192 conserved hypothetical protein no 0.36
    12 Psyr_1589 conserved hypothetical protein no 0.35
    13 Psyr_2450 PAS no 0.35
    14 Psyr_2231 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase no 0.35
    15 Psyr_1126 Heavy metal sensor kinase no 0.35
    16 Psyr_4418 Precorrin-6Y C5,15-methyltransferase (decarboxylating) no 0.35
    17 Psyr_1900 ApbE-like lipoprotein no 0.34
    18 Psyr_1436 Major royal jelly protein no 0.34
    19 Psyr_4256 conserved hypothetical protein no 0.33
    20 Psyr_1042 Protein of unknown function DUF6 no 0.33

    Or look for negative cofitness