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  • Top cofit genes for Psyr_4141 from Pseudomonas syringae pv. syringae B728a

    ABC transporter
    SEED: Uncharacterized ABC transporter, ATP-binding protein YrbF
    KEGG: putative ABC transport system ATP-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_4139 Mce4/Rv3499c/MTV023.06c protein 0.99 0.65
    2 Psyr_1910 VacJ-like lipoprotein 0.99 0.65
    3 Psyr_4138 Toluene tolerance 0.98 0.57
    4 Psyr_3691 conserved hypothetical protein 0.93 0.48
    5 Psyr_4887 Peptidase S41A, C-terminal protease 0.87 0.41
    6 Psyr_0402 Peptidoglycan glycosyltransferase 0.86 0.41
    7 Psyr_1251 quinoprotein 0.84 0.40
    8 Psyr_0947 TPR repeat protein:TPR repeat protein 0.87 0.40
    9 Psyr_2866 Secretion protein HlyD no 0.39
    10 Psyr_4140 Protein of unknown function DUF140 1.00 0.39
    11 Psyr_1737 carbohydrate ABC transporter ATP-binding protein, CUT1 family 0.46 0.39
    12 Psyr_5006 HAD-superfamily hydrolase, subfamily IA, variant 3 no 0.38
    13 Psyr_3043 Paraquat-inducible protein A no 0.37
    14 Psyr_2066 Protein of unknown function DUF214:Fimbrial assembly no 0.36
    15 Psyr_5019 Acetyl-CoA hydrolase 0.57 0.36
    16 Psyr_2986 Glycoside hydrolase, family 15 no 0.36
    17 Psyr_3067 conserved hypothetical protein no 0.36
    18 Psyr_0215 Exodeoxyribonuclease III xth 0.46 0.36
    19 Psyr_3621 conserved hypothetical protein 0.40 0.36
    20 Psyr_1584 Aspartyl/Asparaginyl beta-hydroxylase 0.76 0.36

    Or look for negative cofitness