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  • Top cofit genes for Psyr_4140 from Pseudomonas syringae pv. syringae B728a

    Protein of unknown function DUF140
    SEED: Uncharacterized ABC transporter, permease component YrbE
    KEGG: putative ABC transport system permease protein

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_4975 hypothetical protein no 0.42
    2 Psyr_4197 DNA replication and repair protein RecN 0.56 0.41
    3 Psyr_3985 Pectate lyase/Amb allergen no 0.41
    4 Psyr_0981 conserved hypothetical protein no 0.41
    5 Psyr_4141 ABC transporter 1.00 0.39
    6 Psyr_1614 lipid A biosynthesis acyltransferase 0.56 0.39
    7 Psyr_4501 transcriptional regulator, MarR family 0.81 0.38
    8 Psyr_3691 conserved hypothetical protein 0.89 0.38
    9 Psyr_1811 transcriptional regulator, GntR family no 0.38
    10 Psyr_4828 urocanate hydratase no 0.38
    11 Psyr_4144 Protein of unknown function DUF1239 0.45 0.37
    12 Psyr_2810 hypothetical protein no 0.36
    13 Psyr_2000 transcriptional regulator, GntR family no 0.36
    14 Psyr_0550 Protein of unknown function UPF0227 0.87 0.36
    15 Psyr_2692 Polysaccharide deacetylase 0.85 0.35
    16 Psyr_4940 3'(2'),5'-bisphosphate nucleotidase no 0.35
    17 Psyr_4871 hypothetical protein no 0.35
    18 Psyr_2906 Pilus retraction protein PilT no 0.34
    19 Psyr_0753 Protein of unknown function DUF187 0.86 0.34
    20 Psyr_2685 ornithine carbamoyltransferase 0.83 0.34

    Or look for negative cofitness