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  • Top cofit genes for Psyr_4112 from Pseudomonas syringae pv. syringae B728a

    Protein of unknown function UPF0011
    SEED: rRNA small subunit methyltransferase I

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_4259 ATP-dependent protease, putative 0.27 0.70
    2 Psyr_4381 arginine decarboxylase 0.54 0.64
    3 Psyr_4932 agmatine deiminase 0.52 0.63
    4 Psyr_4933 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 0.44 0.63
    5 Psyr_4203 SsrA-binding protein 0.35 0.54
    6 Psyr_3164 Protein of unknown function UPF0005 0.61 0.53
    7 Psyr_3581 ribosomal large subunit pseudouridine synthase B 0.49 0.53
    8 Psyr_4206 GGDEF domain protein no 0.52
    9 Psyr_3876 amino acid ABC transporter membrane protein 2, PAAT family 0.34 0.51
    10 Psyr_3423 coproporphyrinogen III oxidase, anaerobic 0.62 0.51
    11 Psyr_3878 amino acid ABC transporter ATP-binding protein, PAAT family 0.66 0.50
    12 Psyr_2346 conserved hypothetical protein no 0.49
    13 Psyr_2642 hypothetical protein no 0.48
    14 Psyr_2659 Protein of unknown function DUF955 no 0.48
    15 Psyr_1021 Short-chain dehydrogenase/reductase SDR 0.73 0.48
    16 Psyr_4886 Peptidase M23B 0.61 0.47
    17 Psyr_4686 8-amino-7-oxononanoate synthase 0.67 0.47
    18 Psyr_4836 N-formylglutamate deformylase 0.54 0.47
    19 Psyr_4687 biotin synthase 0.67 0.47
    20 Psyr_1934 conserved hypothetical protein no 0.47

    Or look for negative cofitness