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  • Top cofit genes for Psyr_4100 from Pseudomonas syringae pv. syringae B728a

    D-alanine--D-alanine ligase
    SEED: D-alanine--D-alanine ligase (EC 6.3.2.4)
    KEGG: D-alanine-D-alanine ligase

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_0219 phosphomannomutase no 0.64
    2 Psyr_1055 Membrane bound O-acyl transferase, MBOAT no 0.62
    3 Psyr_1060 Sel1-like repeat protein no 0.60
    4 Psyr_0914 Glycosyl transferase, group 1 no 0.59
    5 Psyr_3636 Polysaccharide biosynthesis protein CapD 0.73 0.59
    6 Psyr_1053 alginate biosynthesis protein AlgF 0.64 0.58
    7 Psyr_3637 Glycosyl transferase, family 4 0.54 0.58
    8 Psyr_0915 NAD-dependent epimerase/dehydratase no 0.58
    9 Psyr_4130 Peptidase S1, chymotrypsin:PDZ/DHR/GLGF no 0.57
    10 Psyr_0920 Glycosyl transferase, group 1 0.34 0.57
    11 Psyr_0923 hypothetical protein 0.38 0.56
    12 Psyr_3958 RNA polymerase, sigma-24 subunit, RpoE no 0.56
    13 Psyr_1062 alginate biosynthesis protein Alg8 0.83 0.56
    14 Psyr_3141 type II and III secretion system protein:NolW-like protein no 0.55
    15 Psyr_4886 Peptidase M23B 0.74 0.55
    16 Psyr_0534 membrane protein, putative no 0.55
    17 Psyr_0758 beta-fructofuranosidase no 0.54
    18 Psyr_0167 hypothetical protein no 0.54
    19 Psyr_1401 Histidine triad (HIT) protein no 0.54
    20 Psyr_0936 Glycosyl transferase, group 1 0.34 0.54

    Or look for negative cofitness