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  • Top cofit genes for Psyr_4078 from Pseudomonas syringae pv. syringae B728a

    AmpG-related permease
    SEED: AmpG permease
    KEGG: MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_4623 Aminoglycoside phosphotransferase 0.99 0.92
    2 Psyr_4567 Protein of unknown function UPF0075 0.99 0.77
    3 Psyr_3281 Glycoside hydrolase, family 3, N-terminal 0.96 0.73
    4 Psyr_3469 Glycosyl transferase, family 2 0.79 0.71
    5 Psyr_4622 Nucleotidyl transferase 0.84 0.68
    6 Psyr_4882 protein translocase subunit secB 0.63 0.67
    7 Psyr_4678 GGDEF domain protein 0.38 0.66
    8 Psyr_3485 MCP methyltransferase, CheR-type 0.53 0.65
    9 Psyr_3470 Flagellin, N-terminal 0.71 0.64
    10 Psyr_4878 outer membrane porin 0.80 0.64
    11 Psyr_0200 conserved hypothetical protein 0.32 0.62
    12 Psyr_3856 Helicase c2 0.31 0.62
    13 Psyr_3480 Flagellar basal-body rod protein FlgC 0.39 0.61
    14 Psyr_3435 chemotaxis phosphatase, CheZ 0.38 0.60
    15 Psyr_3471 Flagellar basal body rod protein:Protein of unknown function DUF1078 0.40 0.60
    16 Psyr_1044 transcriptional regulator, LysR family 0.71 0.58
    17 Psyr_5065 ATP-dependent DNA helicase UvrD no 0.57
    18 Psyr_2138 Glycosyl transferase, family 2 0.36 0.57
    19 Psyr_4473 OmpW no 0.57
    20 Psyr_3428 CheW-like protein 0.61 0.57

    Or look for negative cofitness