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Gene
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Cofit
Protein
Homologs
Top cofit genes for Psyr_4054 from
Pseudomonas syringae pv. syringae B728a
hypothetical protein
SEED: Lipoprotein NlpD
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Psyr
_3300
Conserved hypothetical protein 147
no
0.39
2
Psyr
_3318
conserved hypothetical protein
no
0.38
3
Psyr
_4155
Protein of unknown function DUF615
no
0.38
4
Psyr
_2100
assimilatory nitrate reductase (NADH) beta subunit
no
0.38
5
Psyr
_4131
Transposase, IS111A/IS1328/IS1533:Transposase IS116/IS110/IS902
no
0.37
6
Psyr
_1298
exonuclease RecJ
no
0.37
7
Psyr
_4480
outer membrane transport energization protein TonB
no
0.37
8
Psyr
_0214
conserved hypothetical protein
no
0.36
9
Psyr
_1832
Exonuclease
no
0.35
10
Psyr
_3935
Short-chain dehydrogenase/reductase SDR
no
0.35
11
Psyr
_1275
Protein of unknown function DUF1289
no
0.35
12
Psyr
_0336
Outer membrane autotransporter barrel
no
0.34
13
Psyr
_1301
Protein of unknown function DUF533
no
0.34
14
Psyr
_4495
Beta-lactamase
no
0.34
15
Psyr
_4578
conserved hypothetical protein
no
0.34
16
Psyr
_2032
two component transcriptional regulator, winged helix family
no
0.32
17
Psyr
_4372
aspartate carbamoyltransferase
no
0.32
18
Psyr
_1817
condensin subunit Smc
no
0.32
19
Psyr
_2046
conserved hypothetical protein
no
0.32
20
Psyr
_3296
MOSC:MOSC, N-terminal beta barrel
no
0.32
Or look for
negative cofitness