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  • Top cofit genes for Psyr_4001 from Pseudomonas syringae pv. syringae B728a

    conserved domain protein
    SEED: Conserved domain protein precursor

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_4956 protein of unknown function DUF879 no 0.41
    2 Psyr_0115 membrane protein, putative no 0.41
    3 Psyr_3813 type III effector HopAF1 no 0.38
    4 Psyr_0636 LrgA no 0.38
    5 Psyr_0494 Protein of unknown function UPF0061 no 0.38
    6 Psyr_0116 Lysine exporter protein (LYSE/YGGA) no 0.37
    7 Psyr_2176 Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal no 0.37
    8 Psyr_3622 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase no 0.37
    9 Psyr_2361 DNA damage-inducible DNA polymerase II no 0.36
    10 Psyr_2365 Radical SAM no 0.36
    11 Psyr_1041 transcriptional regulator, AraC family no 0.36
    12 Psyr_1002 nucleoside ABC transporter ATP-binding protein no 0.36
    13 Psyr_1179 Oligopeptide transporter OPT superfamily no 0.36
    14 Psyr_2124 Benzoate transport no 0.35
    15 Psyr_0745 CDS no 0.35
    16 Psyr_3986 GCN5-related N-acetyltransferase no 0.35
    17 Psyr_2144 conserved hypothetical protein no 0.35
    18 Psyr_3241 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region:D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein no 0.35
    19 Psyr_1167 nucleoside ABC transporter membrane protein no 0.35
    20 Psyr_4618 regulatory protein, LuxR:Response regulator receiver no 0.35

    Or look for negative cofitness