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  • Top cofit genes for Psyr_3995 from Pseudomonas syringae pv. syringae B728a

    Helix-turn-helix, Fis-type
    SEED: Nitrogen regulation protein NR(I)
    KEGG: two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_3994 ATP-binding region, ATPase-like:Histidine kinase A, N-terminal 0.94 0.56
    2 Psyr_3999 General substrate transporter:Major facilitator superfamily 0.96 0.48
    3 Psyr_4228 transcriptional regulator, GntR family 0.51 0.39
    4 Psyr_0401 Malate dehydrogenase (oxaloacetate decarboxylating) (NADP+) 0.44 0.39
    5 Psyr_2533 FAD linked oxidase, C-terminal:FAD linked oxidase, N-terminal no 0.38
    6 Psyr_0839 Deoxyribose-phosphate aldolase no 0.37
    7 Psyr_4414 precorrin-3 methyltransferase no 0.36
    8 Psyr_2148 Deoxyribonuclease I no 0.36
    9 Psyr_1090 DNA polymerase III, chi subunit no 0.36
    10 Psyr_1756 Binding-protein-dependent transport systems inner membrane component no 0.35
    11 Psyr_5070 Pyridoxal kinase no 0.35
    12 Psyr_1149 conserved hypothetical protein no 0.35
    13 Psyr_5006 HAD-superfamily hydrolase, subfamily IA, variant 3 no 0.35
    14 Psyr_2173 Electron transfer flavoprotein, alpha subunit no 0.34
    15 Psyr_0926 dTDP-glucose 4,6-dehydratase no 0.34
    16 Psyr_2452 Enoyl-CoA hydratase/isomerase no 0.33
    17 Psyr_4010 Citrate-proton symport no 0.33
    18 Psyr_1280 Cytochrome c assembly protein no 0.33
    19 Psyr_2640 NUDIX hydrolase no 0.32
    20 Psyr_4488 L-fucose permease no 0.32

    Or look for negative cofitness