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  • Top cofit genes for Psyr_3968 from Pseudomonas syringae pv. syringae B728a

    Protein of unknown function DUF112
    SEED: Tricarboxylate transport membrane protein TctA
    KEGG: putative tricarboxylic transport membrane protein

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_1258 Peptidase M23B no 0.47
    2 Psyr_2794 Protein of unknown function DUF264 no 0.46
    3 Psyr_2119 Acyltransferase 3 no 0.43
    4 Psyr_3346 conserved hypothetical protein no 0.43
    5 Psyr_4504 carbohydrate ABC transporter membrane protein 2, CUT1 family no 0.43
    6 Psyr_3156 transcriptional regulator, LysR family no 0.41
    7 Psyr_1980 Heat shock protein Hsp20 0.56 0.41
    8 Psyr_2867 ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal no 0.41
    9 Psyr_3242 Glycerophosphodiester phosphodiesterase no 0.40
    10 Psyr_1301 Protein of unknown function DUF533 no 0.40
    11 Psyr_2243 Endoribonuclease L-PSP no 0.39
    12 Psyr_2706 gamma-glutamyl-gamma-aminobutyrate hydrolase no 0.39
    13 Psyr_1992 Zinc-containing alcohol dehydrogenase superfamily no 0.39
    14 Psyr_1250 conserved hypothetical protein no 0.39
    15 Psyr_0278 ABC-3 0.45 0.39
    16 Psyr_4246 hypothetical protein no 0.38
    17 Psyr_0516 ATP-dependent RNA helicase DbpA no 0.38
    18 Psyr_2491 glycogen branching enzyme 0.86 0.38
    19 Psyr_2844 hypothetical protein no 0.38
    20 Psyr_3101 Alpha/beta hydrolase fold protein no 0.38

    Or look for negative cofitness