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  • Top cofit genes for Psyr_3946 from Pseudomonas syringae pv. syringae B728a

    Proteobacterial methyltransferase
    SEED: tRNA (uridine-5-oxyacetic acid methyl ester) 34 synthase
    KEGG: tRNA (cmo5U34)-methyltransferase

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_4259 ATP-dependent protease, putative 0.27 0.58
    2 Psyr_4687 biotin synthase 0.69 0.46
    3 Psyr_4686 8-amino-7-oxononanoate synthase no 0.46
    4 Psyr_2899 conserved hypothetical protein no 0.46
    5 Psyr_4112 Protein of unknown function UPF0011 0.60 0.45
    6 Psyr_3817 conserved hypothetical protein no 0.43
    7 Psyr_0188 Protein of unknown function UPF0047 no 0.42
    8 Psyr_4203 SsrA-binding protein 0.46 0.42
    9 Psyr_4932 agmatine deiminase 0.25 0.41
    10 Psyr_4684 biotin synthesis protein BioC 0.42 0.41
    11 Psyr_3658 Rhodanese-like protein 0.86 0.41
    12 Psyr_1907 GTP cyclohydrolase I 0.34 0.41
    13 Psyr_0566 4Fe-4S cluster binding protein 0.54 0.40
    14 Psyr_2346 conserved hypothetical protein no 0.40
    15 Psyr_4340 phosphomethylpyrimidine kinase, putative 0.30 0.39
    16 Psyr_3766 hypothetical protein no 0.39
    17 Psyr_4683 dethiobiotin synthase 0.44 0.39
    18 Psyr_0454 adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme 0.67 0.38
    19 Psyr_0881 hypothetical protein no 0.38
    20 Psyr_0130 hypothetical protein no 0.38

    Or look for negative cofitness