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  • Top cofit genes for Psyr_3942 from Pseudomonas syringae pv. syringae B728a

    diguanylate cyclase/phosphodiesterase
    SEED: diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_0844 Protein of unknown function DUF446 no 0.44
    2 Psyr_3501 General substrate transporter:Major facilitator superfamily no 0.37
    3 Psyr_5011 Amino acid adenylation:Thioester reductase no 0.37
    4 Psyr_2621 Secretion protein HlyD no 0.37
    5 Psyr_3917 transcriptional regulator, LysR family no 0.37
    6 Psyr_4997 YD repeat protein no 0.37
    7 Psyr_5024 conserved hypothetical protein no 0.37
    8 Psyr_4580 anthranilate phosphoribosyltransferase no 0.36
    9 Psyr_3161 Type I secretion system ATPase, PrtD 0.12 0.34
    10 Psyr_0654 Copper-translocating P-type ATPase:Heavy metal translocating P-type ATPase 0.42 0.34
    11 Psyr_0026 Sulfate transporter/antisigma-factor antagonist STAS:Sulphate transporter no 0.34
    12 Psyr_2033 conserved hypothetical protein no 0.34
    13 Psyr_2064 conserved hypothetical protein no 0.34
    14 Psyr_3293 UspA no 0.33
    15 Psyr_1776 Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer no 0.33
    16 Psyr_3322 Major facilitator superfamily no 0.33
    17 Psyr_4508 Endo-1,4-beta-xylanase no 0.33
    18 Psyr_2807 NinB no 0.33
    19 Psyr_4442 membrane protein, putative no 0.33
    20 Psyr_4026 Protein of unknown function DUF58 no 0.33

    Or look for negative cofitness