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  • Top cofit genes for Psyr_3909 from Pseudomonas syringae pv. syringae B728a

    L-aspartate ABC transporter membrane protein / L-glutamate ABC transporter membrane protein
    SEED: Glutamate Aspartate transport system permease protein GltJ (TC 3.A.1.3.4)
    KEGG: glutamate/aspartate transport system permease protein

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_1614 lipid A biosynthesis acyltransferase 0.45 0.39
    2 Psyr_2713 transcriptional regulator, LysR family no 0.37
    3 Psyr_4267 conserved hypothetical protein 0.40 0.36
    4 Psyr_0426 lipoprotein, putative no 0.36
    5 Psyr_2290 TonB-dependent receptor:TonB-dependent receptor no 0.36
    6 Psyr_1888 CDS no 0.35
    7 Psyr_2501 Hemerythrin no 0.35
    8 Psyr_2647 hypothetical protein no 0.35
    9 Psyr_3494 hypothetical protein no 0.35
    10 Psyr_1704 Amino acid adenylation no 0.35
    11 Psyr_2046 conserved hypothetical protein no 0.35
    12 Psyr_0796 type 4 prepilin peptidase 1, Aspartic peptidase, MEROPS family A24A 0.60 0.34
    13 Psyr_0380 Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer no 0.34
    14 Psyr_1613 septum site-determining protein MinC no 0.33
    15 Psyr_3902 ABC transporter:TOBE no 0.33
    16 Psyr_1752 transcriptional regulator, HxlR family no 0.33
    17 Psyr_2646 Radical SAM no 0.32
    18 Psyr_4982 hypothetical protein no 0.32
    19 Psyr_2025 Phenylacetic acid degradation-related protein 0.43 0.32
    20 Psyr_0128 H-NS family protein MvaT 0.20 0.32

    Or look for negative cofitness