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  • Top cofit genes for Psyr_3839 from Pseudomonas syringae pv. syringae B728a

    type III helper protein HopAK1
    SEED: Pectate lyase precursor (EC 4.2.2.2)

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_1705 Amino acid adenylation 0.46 0.61
    2 Psyr_1048 Secretion protein HlyD no 0.52
    3 Psyr_0758 beta-fructofuranosidase no 0.49
    4 Psyr_0555 Protein of unknown function DUF330 no 0.48
    5 Psyr_1625 2-oxo-acid dehydrogenase E1 component homodimeric type 0.53 0.47
    6 Psyr_1218 type III helper protein HrpK1 no 0.47
    7 Psyr_1211 type III secretion protein HrpP no 0.45
    8 Psyr_2614 Amino acid adenylation no 0.42
    9 Psyr_4895 conserved hypothetical protein no 0.42
    10 Psyr_2613 Cyclic peptide transporter no 0.42
    11 Psyr_1055 Membrane bound O-acyl transferase, MBOAT 0.45 0.42
    12 Psyr_3150 type II secretion system protein no 0.41
    13 Psyr_4692 ABC transporter no 0.41
    14 Psyr_1395 virulence no 0.41
    15 Psyr_1197 type III secretion protein HrpE no 0.41
    16 Psyr_2615 Amino acid adenylation no 0.41
    17 Psyr_3143 general secretion pathway protein M, putative no 0.40
    18 Psyr_3146 general secretion pathway protein J, putative no 0.40
    19 Psyr_0576 ATP phosphoribosyltransferase regulatory subunit, putative no 0.40
    20 Psyr_1189 SLT:MLTD_N no 0.40

    Or look for negative cofitness