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  • Top cofit genes for Psyr_3825 from Pseudomonas syringae pv. syringae B728a

    transcriptional regulator, LysR family
    SEED: Transcriptional regulator, LysR family

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_2810 hypothetical protein no 0.39
    2 Psyr_0560 conserved hypothetical protein no 0.38
    3 Psyr_4175 Transport-associated protein no 0.38
    4 Psyr_5007 Aldo/keto reductase 0.17 0.38
    5 Psyr_2186 Senescence marker protein-30 (SMP-30) no 0.37
    6 Psyr_5131 16S rRNA m(7)G-527 methyltransferase no 0.37
    7 Psyr_4279 16S rRNA m(2)G 1207 methyltransferase / 23S rRNA m(2)G-1835 methyltransferase no 0.37
    8 Psyr_3300 Conserved hypothetical protein 147 no 0.37
    9 Psyr_3023 conserved hypothetical protein no 0.36
    10 Psyr_1809 Polysaccharide deacetylase 0.58 0.36
    11 Psyr_2962 amino acid ABC transporter substrate-binding protein, PAAT family no 0.36
    12 Psyr_3675 adenosylcobinamide kinase no 0.36
    13 Psyr_1303 Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer no 0.35
    14 Psyr_1689 conserved hypothetical protein no 0.35
    15 Psyr_0111 hypothetical protein no 0.35
    16 Psyr_3590 conserved hypothetical protein no 0.34
    17 Psyr_1202 negative regulator of hrp expression HrpV no 0.34
    18 Psyr_0477 Protein of unknown function UPF0001 no 0.33
    19 Psyr_4615 Spermidine/putrescine ABC transporter ATP-binding subunit 0.37 0.33
    20 Psyr_4069 ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal no 0.33

    Or look for negative cofitness