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  • Top cofit genes for Psyr_3793 from Pseudomonas syringae pv. syringae B728a

    Response regulator receiver:Transcriptional regulatory protein, C-terminal
    SEED: Copper-sensing two-component system response regulator CpxR

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_4504 carbohydrate ABC transporter membrane protein 2, CUT1 family 0.26 0.41
    2 Psyr_1074 amino acid ABC transporter membrane protein 2, PAAT family 0.50 0.39
    3 Psyr_2884 xylose-binding protein no 0.38
    4 Psyr_0200 conserved hypothetical protein no 0.37
    5 Psyr_4515 hypothetical protein no 0.36
    6 Psyr_0493 CheW-like protein no 0.36
    7 Psyr_3242 Glycerophosphodiester phosphodiesterase 0.37 0.36
    8 Psyr_5013 L-carnitine dehydratase/bile acid-inducible protein F no 0.35
    9 Psyr_0214 conserved hypothetical protein no 0.35
    10 Psyr_0419 conserved hypothetical protein no 0.35
    11 Psyr_3083 RND efflux system, outer membrane lipoprotein, NodT no 0.35
    12 Psyr_3712 conserved hypothetical protein no 0.34
    13 Psyr_3466 Flagellin, C-terminal:Flagellin, N-terminal no 0.34
    14 Psyr_1832 Exonuclease 0.11 0.34
    15 Psyr_2119 Acyltransferase 3 no 0.34
    16 Psyr_3830 3-oxoacyl-[acyl-carrier protein] synthase 0.41 0.33
    17 Psyr_3987 Iron-containing alcohol dehydrogenase 0.37 0.33
    18 Psyr_0562 OmpA/MotB no 0.33
    19 Psyr_4150 Uncharacterized P-loop ATPase protein UPF0042 0.65 0.33
    20 Psyr_2253 Phosphonate metabolism no 0.33

    Or look for negative cofitness