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  • Top cofit genes for Psyr_3778 from Pseudomonas syringae pv. syringae B728a

    Substrate-binding region of ABC-type glycine betaine transport system
    SEED: Histidine transporter, periplasmic histidine-binding protein
    KEGG: glycine betaine/proline transport system substrate-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_2563 HAD-superfamily hydrolase, subfamily IIA no 0.49
    2 Psyr_2513 extracellular solute-binding protein, family 1 no 0.43
    3 Psyr_1077 Isoflavone reductase no 0.43
    4 Psyr_0747 CDS no 0.41
    5 Psyr_0941 Conserved hypothetical protein 92 no 0.41
    6 Psyr_0789 chemotaxis sensory transducer no 0.40
    7 Psyr_4718 glutathione-independent formaldehyde dehydrogenase 0.49 0.38
    8 Psyr_4930 outer membrane porin no 0.38
    9 Psyr_2428 GCN5-related N-acetyltransferase no 0.38
    10 Psyr_1832 Exonuclease 0.55 0.37
    11 Psyr_1975 Integrase, catalytic region no 0.36
    12 Psyr_2643 hypothetical protein no 0.36
    13 Psyr_2649 hypothetical protein no 0.36
    14 Psyr_4155 Protein of unknown function DUF615 no 0.36
    15 Psyr_1556 hypothetical protein no 0.35
    16 Psyr_4870 hypothetical protein no 0.35
    17 Psyr_1907 GTP cyclohydrolase I no 0.35
    18 Psyr_4647 hypothetical protein no 0.34
    19 Psyr_3008 Undecaprenyl-diphosphatase no 0.34
    20 Psyr_3458 Flagellar hook-basal body complex protein FliE no 0.34

    Or look for negative cofitness