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  • Top cofit genes for Psyr_3754 from Pseudomonas syringae pv. syringae B728a

    conserved hypothetical protein
    SEED: putative membrane protein

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_4843 NUDIX hydrolase no 0.38
    2 Psyr_3331 Glycolate oxidase subunit GlcD no 0.37
    3 Psyr_4441 heat shock protein YegD 0.26 0.37
    4 Psyr_1164 nucleoside ABC transporter ATP-binding protein no 0.37
    5 Psyr_2686 carbamate kinase no 0.36
    6 Psyr_4242 Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal 0.41 0.36
    7 Psyr_4143 HAD-superfamily hydrolase, subfamily IIIA:Phosphatase YrbI no 0.36
    8 Psyr_0760 carbohydrate ABC transporter membrane protein 2, CUT1 family no 0.36
    9 Psyr_4659 type III effector HopAB1 no 0.34
    10 Psyr_2100 assimilatory nitrate reductase (NADH) beta subunit no 0.33
    11 Psyr_0758 beta-fructofuranosidase no 0.33
    12 Psyr_1655 TatD-related deoxyribonuclease no 0.32
    13 Psyr_2709 Ferredoxin:Oxidoreductase FAD/NAD(P)-binding:Oxidoreductase FAD-binding region 0.26 0.32
    14 Psyr_2374 ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal no 0.32
    15 Psyr_1395 virulence 0.41 0.32
    16 Psyr_3092 PAP2 superfamily protein no 0.31
    17 Psyr_0993 transcriptional regulator, LuxR family no 0.31
    18 Psyr_3165 transcriptional regulator, LysR family no 0.30
    19 Psyr_4169 4-carboxymuconolactone decarboxylase no 0.30
    20 Psyr_0452 HylII 0.26 0.30

    Or look for negative cofitness