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Cofit
Protein
Homologs
Top cofit genes for Psyr_3725 from
Pseudomonas syringae pv. syringae B728a
ATPase
SEED: Glycerate kinase (EC 2.7.1.31)
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Psyr
_1486
Cl- channel, voltage gated
no
0.36
2
Psyr
_4312
Erythronolide synthase
no
0.36
3
Psyr
_1928
regulatory protein, LysR:LysR, substrate-binding protein
no
0.34
4
Psyr
_1439
Beta-lactamase
0.39
0.34
5
Psyr
_2670
Aminoglycoside/hydroxyurea antibiotic resistance kinase
0.38
0.33
6
Psyr
_2602
transcriptional regulator, LuxR family
no
0.33
7
Psyr
_1538
Propionyl-CoA carboxylase
0.39
0.33
8
Psyr
_4988
YD repeat protein
no
0.32
9
Psyr
_4314
Beta-ketoacyl synthase:Beta-ketoacyl synthase:Phosphopantetheine-binding protein
no
0.32
10
Psyr
_4651
S-type Pyocin
0.42
0.32
11
Psyr
_2196
Urease accessory protein UreG
no
0.32
12
Psyr
_3408
Outer membrane autotransporter barrel
no
0.31
13
Psyr
_2175
L-carnitine dehydratase/bile acid-inducible protein F
0.40
0.31
14
Psyr
_0797
type II secretion system protein
no
0.30
15
Psyr
_0748
Major facilitator superfamily
no
0.30
16
Psyr
_3633
threonine/serine transporter
no
0.30
17
Psyr
_3410
hypothetical protein
no
0.30
18
Psyr
_3294
ABC transporter
no
0.30
19
Psyr
_1878
hypothetical protein
0.46
0.29
20
Psyr
_0098
Protein of unknown function DUF87
0.47
0.29
Or look for
negative cofitness