Top cofit genes for Psyr_3655 from Pseudomonas syringae pv. syringae B728a

diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
SEED: Sensory box/GGDEF family protein

Rank	Hit	Name	Description	Conserved?	Cofitness
1	Psyr_4770		diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s)	0.75	0.75
2	Psyr_0478		pilus retraction ATPase PilT	0.44	0.58
3	Psyr_3963		conserved hypothetical protein	0.50	0.55
4	Psyr_0508		lyase, putative	0.46	0.52
5	Psyr_3150		type II secretion system protein	no	0.49
6	Psyr_3656		ABC transporter, transmembrane region:ABC transporter	no	0.49
7	Psyr_0345		Secretion protein HlyD	no	0.46
8	Psyr_3306		Glycoside hydrolase, family 5	no	0.45
9	Psyr_0074		diguanylate cyclase/phosphodiesterase	0.68	0.44
10	Psyr_1982		transcriptional regulator, LysR family	no	0.43
11	Psyr_4387		Glycosyl transferase, family 51:Penicillin-binding protein, transpeptidase:Penicillin-binding, C-terminal	0.37	0.42
12	Psyr_3658		Rhodanese-like protein	no	0.41
13	Psyr_2431		Zinc-containing alcohol dehydrogenase superfamily	no	0.41
14	Psyr_2510		2-keto-3-deoxygluconate kinase	no	0.40
15	Psyr_1941		ATP-binding region, ATPase-like:Histidine kinase	no	0.39
16	Psyr_0994		Metal-dependent phosphohydrolase, HD subdomain protein	no	0.39
17	Psyr_1667		Colicin V production protein	0.25	0.39
18	Psyr_4148		sigma 54 modulation protein / SSU ribosomal protein S30P	no	0.38
19	Psyr_3899		Molybdopterin oxidoreductase:molybdopterin dinucleotide-binding region	0.25	0.37
20	Psyr_1308		Protein-glutamate methylesterase	0.70	0.37

Or look for negative cofitness