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  • Top cofit genes for Psyr_3648 from Pseudomonas syringae pv. syringae B728a

    methylthioribose-1-phosphate isomerase
    SEED: Methylthioribose-1-phosphate isomerase (EC 5.3.1.23)
    KEGG: methylthioribose-1-phosphate isomerase

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_3565 succinylornithine aminotransferase apoenzyme / acetylornithine aminotransferase apoenzyme 0.56 0.47
    2 Psyr_0892 Sigma-70 region 2:Sigma-70 region 4 no 0.43
    3 Psyr_3492 L-glutamine synthetase no 0.41
    4 Psyr_4214 Binding-protein-dependent transport systems inner membrane component 0.33 0.39
    5 Psyr_2672 Citrate transporter no 0.38
    6 Psyr_3897 Bacterioferritin no 0.38
    7 Psyr_4798 conserved hypothetical protein no 0.38
    8 Psyr_3787 conserved hypothetical protein no 0.37
    9 Psyr_4066 conserved hypothetical protein no 0.37
    10 Psyr_1992 Zinc-containing alcohol dehydrogenase superfamily no 0.37
    11 Psyr_2276 glutamate synthase (NADPH) GltB2 subunit no 0.37
    12 Psyr_1570 Copper resistance B precursor no 0.35
    13 Psyr_4259 ATP-dependent protease, putative 0.37 0.35
    14 Psyr_3610 GAF no 0.35
    15 Psyr_0906 Histidine kinase, HAMP region:Cache:Bacterial chemotaxis sensory transducer no 0.35
    16 Psyr_3586 Phosphoesterase PHP, N-terminal:PHP, C-terminal 0.43 0.34
    17 Psyr_0145 conserved hypothetical protein no 0.33
    18 Psyr_0689 methylmalonate-semialdehyde dehydrogenase (acylating) 0.41 0.33
    19 Psyr_0611 ABC transporter no 0.33
    20 Psyr_0877 outer membrane transport energization protein ExbB no 0.33

    Or look for negative cofitness