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  • Top cofit genes for Psyr_3606 from Pseudomonas syringae pv. syringae B728a

    ABC transporter, substrate-binding protein, aliphatic sulfonate
    SEED: ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
    KEGG: sulfonate/nitrate/taurine transport system substrate-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_5019 Acetyl-CoA hydrolase 0.34 0.43
    2 Psyr_1484 conserved hypothetical protein no 0.40
    3 Psyr_2866 Secretion protein HlyD no 0.38
    4 Psyr_2215 CheW-like protein no 0.38
    5 Psyr_0723 Sensor protein PilS no 0.38
    6 Psyr_1800 transcriptional regulator, LysR family no 0.38
    7 Psyr_1169 nucleoside-binding protein no 0.36
    8 Psyr_3058 Amidase no 0.36
    9 Psyr_0982 conserved hypothetical protein 0.15 0.36
    10 Psyr_1179 Oligopeptide transporter OPT superfamily no 0.36
    11 Psyr_1073 amino acid ABC transporter membrane protein 1, PAAT family no 0.35
    12 Psyr_4829 Substrate-binding region of ABC-type glycine betaine transport system no 0.35
    13 Psyr_2450 PAS no 0.35
    14 Psyr_1015 Protein of unknown function DUF540 no 0.34
    15 Psyr_4628 Protein of unknown function DUF525 no 0.34
    16 Psyr_4837 Heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase:Heavy metal translocating P-type ATPase no 0.34
    17 Psyr_0615 conserved hypothetical protein no 0.33
    18 Psyr_4620 conserved hypothetical protein 0.39 0.33
    19 Psyr_3938 Amidase no 0.33
    20 Psyr_3069 conserved hypothetical protein no 0.33

    Or look for negative cofitness