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  • Top cofit genes for Psyr_3329 from Pseudomonas syringae pv. syringae B728a

    diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s)
    SEED: diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_2722 LamB/YcsF no 0.45
    2 Psyr_4998 hypothetical protein no 0.40
    3 Psyr_0544 hydroxymethylpyrimidine synthase no 0.39
    4 Psyr_2431 Zinc-containing alcohol dehydrogenase superfamily no 0.38
    5 Psyr_4277 Oxidoreductase FAD/NAD(P)-binding:Oxidoreductase FAD-binding region no 0.37
    6 Psyr_0030 transcriptional regulator, LysR family no 0.37
    7 Psyr_1759 extracellular solute-binding protein, family 5 no 0.36
    8 Psyr_0232 gamma-glutamylputrescine oxidase no 0.36
    9 Psyr_3733 Outer membrane autotransporter barrel no 0.36
    10 Psyr_0816 conserved hypothetical protein no 0.35
    11 Psyr_1963 Cyclic peptide transporter no 0.34
    12 Psyr_3544 putative integral membrane protein no 0.34
    13 Psyr_0208 endoribonuclease L-PSP no 0.34
    14 Psyr_3959 L-aspartate oxidase no 0.34
    15 Psyr_4134 ATP phosphoribosyltransferase (homohexameric) no 0.34
    16 Psyr_3757 Protein of unknown function DUF485 no 0.34
    17 Psyr_4010 Citrate-proton symport 0.45 0.33
    18 Psyr_3984 DNA helicase related protein no 0.33
    19 Psyr_1542 quinolinate synthetase no 0.33
    20 Psyr_0459 5,10-methylenetetrahydrofolate reductase no 0.33

    Or look for negative cofitness