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Cofit
Protein
Homologs
Top cofit genes for Psyr_3328 from
Pseudomonas syringae pv. syringae B728a
GGDEF domain protein
SEED: FOG: GGDEF domain
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Psyr
_3123
type III effector HopAH2
no
0.42
2
Psyr
_1481
Inorganic diphosphatase
no
0.41
3
Psyr
_0135
outer membrane transport energization protein TonB
no
0.41
4
Psyr
_3410
hypothetical protein
no
0.40
5
Psyr
_4982
hypothetical protein
no
0.39
6
Psyr
_3378
Fusaric acid resistance protein conserved region
no
0.39
7
Psyr
_1704
Amino acid adenylation
no
0.39
8
Psyr
_3691
conserved hypothetical protein
0.26
0.39
9
Psyr
_3270
AP endonuclease, family 2
no
0.38
10
Psyr
_1614
lipid A biosynthesis acyltransferase
no
0.38
11
Psyr
_0745
CDS
no
0.37
12
Psyr
_2866
Secretion protein HlyD
no
0.37
13
Psyr
_2303
UbiA prenyltransferase
no
0.37
14
Psyr
_3343
GCN5-related N-acetyltransferase
no
0.37
15
Psyr
_2206
amino acid/amide ABC transporter substrate-binding protein, HAAT family
no
0.36
16
Psyr
_3877
Succinylglutamate desuccinylase/aspartoacylase
no
0.36
17
Psyr
_2081
conserved hypothetical protein
no
0.36
18
Psyr
_2228
conserved hypothetical protein
no
0.36
19
Psyr
_1527
conserved hypothetical protein
no
0.36
20
Psyr
_3352
GCN5-related N-acetyltransferase
no
0.35
Or look for
negative cofitness