• Private Fitness
  • Home
  • Find Gene
  • BLAST
  • Experiments
  • Organisms
  • Help
  • Gene
  • Fitness
  • Nearby
  • Cofit
  • Protein
  • Homologs
  • Top cofit genes for Psyr_3326 from Pseudomonas syringae pv. syringae B728a

    homogentisate 1,2-dioxygenase
    SEED: Homogentisate 1,2-dioxygenase (EC 1.13.11.5)
    KEGG: homogentisate 1,2-dioxygenase

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_5111 dTDP-glucose 4,6-dehydratase no 0.40
    2 Psyr_2883 D-xylose isomerase no 0.38
    3 Psyr_1884 CDS no 0.35
    4 Psyr_4216 regulatory protein, LuxR no 0.33
    5 Psyr_2864 RND efflux system, outer membrane lipoprotein, NodT no 0.32
    6 Psyr_3368 Protein of unknown function DUF451 no 0.31
    7 Psyr_4688 Phosphoribosyltransferase 0.64 0.31
    8 Psyr_1188 type III effector protein AvrE1 no 0.29
    9 Psyr_4021 RDD no 0.28
    10 Psyr_1198 type III secretion protein HrpF no 0.28
    11 Psyr_4812 sorbitol-binding protein / mannitol-binding protein no 0.27
    12 Psyr_4904 hypothetical protein no 0.27
    13 Psyr_0645 3-ketoacyl-CoA thiolase 0.76 0.27
    14 Psyr_4651 S-type Pyocin no 0.27
    15 Psyr_4291 hypothetical protein no 0.26
    16 Psyr_3542 Short-chain dehydrogenase/reductase SDR no 0.26
    17 Psyr_4998 hypothetical protein no 0.26
    18 Psyr_1886 Hemolysin-type calcium-binding region no 0.26
    19 Psyr_1917 conserved hypothetical protein no 0.26
    20 Psyr_2329 extracellular solute-binding protein, family 1 no 0.25

    Or look for negative cofitness