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Cofit
Protein
Homologs
Top cofit genes for Psyr_3308 from
Pseudomonas syringae pv. syringae B728a
Glycosyl transferase, group 1
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Psyr
_3307
Glycosyl transferase, group 1
0.53
0.82
2
Psyr
_2138
Glycosyl transferase, family 2
0.32
0.81
3
Psyr
_3304
Lipopolysaccharide biosynthesis
0.63
0.72
4
Psyr
_4678
GGDEF domain protein
no
0.68
5
Psyr
_3301
Undecaprenyl-phosphate galactosephosphotransferase
no
0.68
6
Psyr
_3487
flagellar protein FlgA
0.50
0.67
7
Psyr
_3435
chemotaxis phosphatase, CheZ
no
0.65
8
Psyr
_3457
Flagellar FliF M-ring protein
no
0.65
9
Psyr
_3474
Flagellar L-ring protein
no
0.65
10
Psyr
_3437
RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG
no
0.64
11
Psyr
_3441
Flagellar biosynthetic protein FlhB
no
0.64
12
Psyr
_3303
Polysaccharide export protein
0.64
0.63
13
Psyr
_3447
Flagellar motor switch protein FliM
no
0.61
14
Psyr
_3478
Flagellar basal body rod protein:Protein of unknown function DUF1078:Flagellar basal body FlaE
no
0.60
15
Psyr
_3461
Helix-turn-helix, Fis-type
no
0.60
16
Psyr
_3472
Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase
no
0.58
17
Psyr
_3439
GTP-binding signal recognition particle SRP54, G-domain protein
no
0.58
18
Psyr
_3448
Flagellar basal body-associated protein FliL
no
0.58
19
Psyr
_3463
Flagellar protein FliS
no
0.57
20
Psyr
_1044
transcriptional regulator, LysR family
no
0.57
Or look for
negative cofitness