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Cofit
Protein
Homologs
Top cofit genes for Psyr_3300 from
Pseudomonas syringae pv. syringae B728a
Conserved hypothetical protein 147
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Psyr
_4363
membrane-bound lytic murein transglycosylase B
0.60
0.52
2
Psyr
_4659
type III effector HopAB1
no
0.52
3
Psyr
_0336
Outer membrane autotransporter barrel
no
0.50
4
Psyr
_1719
conserved hypothetical protein
no
0.49
5
Psyr
_4922
Short-chain dehydrogenase/reductase SDR
0.42
0.48
6
Psyr
_3318
conserved hypothetical protein
no
0.48
7
Psyr
_4372
aspartate carbamoyltransferase
no
0.47
8
Psyr
_1401
Histidine triad (HIT) protein
0.20
0.47
9
Psyr
_2424
Integral membrane protein TerC
no
0.47
10
Psyr
_2039
Fimbrial protein
no
0.46
11
Psyr
_0074
diguanylate cyclase/phosphodiesterase
no
0.46
12
Psyr
_1216
type III secretion outer membrane protein PopN
no
0.44
13
Psyr
_0288
Carbonate dehydratase
0.35
0.44
14
Psyr
_4175
Transport-associated protein
no
0.44
15
Psyr
_1055
Membrane bound O-acyl transferase, MBOAT
0.39
0.44
16
Psyr
_1614
lipid A biosynthesis acyltransferase
no
0.44
17
Psyr
_0595
Nicotinate phosphoribosyltransferase
0.52
0.44
18
Psyr
_3929
conserved hypothetical protein
no
0.43
19
Psyr
_2810
hypothetical protein
no
0.43
20
Psyr
_2995
maltooligosyl trehalose synthase
0.16
0.43
Or look for
negative cofitness