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  • Top cofit genes for Psyr_3254 from Pseudomonas syringae pv. syringae B728a

    multisubunit potassium/proton antiporter, PhaD subunit
    SEED: Na(+) H(+) antiporter subunit D
    KEGG: multicomponent K+:H+ antiporter subunit D

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_1625 2-oxo-acid dehydrogenase E1 component homodimeric type no 0.54
    2 Psyr_5052 Sodium:alanine symporter 0.30 0.47
    3 Psyr_3958 RNA polymerase, sigma-24 subunit, RpoE 0.33 0.46
    4 Psyr_1216 type III secretion outer membrane protein PopN no 0.45
    5 Psyr_1350 site-2 protease, Metallo peptidase, MEROPS family M50B 0.71 0.44
    6 Psyr_1212 type III secretion protein HrpO no 0.44
    7 Psyr_1196 type III secretion protein HrpD no 0.44
    8 Psyr_3536 hypothetical protein no 0.44
    9 Psyr_5011 Amino acid adenylation:Thioester reductase 0.35 0.43
    10 Psyr_1200 outer-membrane type III secretion protein HrcC no 0.43
    11 Psyr_4130 Peptidase S1, chymotrypsin:PDZ/DHR/GLGF 0.29 0.43
    12 Psyr_4609 anthranilate synthase, component I 0.27 0.43
    13 Psyr_1218 type III helper protein HrpK1 no 0.42
    14 Psyr_2277 ammonium transporter no 0.41
    15 Psyr_1053 alginate biosynthesis protein AlgF 0.33 0.41
    16 Psyr_1748 ATP-dependent Clp protease ATP-binding subunit ClpX 0.56 0.41
    17 Psyr_1055 Membrane bound O-acyl transferase, MBOAT no 0.40
    18 Psyr_2501 Hemerythrin no 0.40
    19 Psyr_4501 transcriptional regulator, MarR family no 0.40
    20 Psyr_1211 type III secretion protein HrpP no 0.40

    Or look for negative cofitness