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  • Top cofit genes for Psyr_3245 from Pseudomonas syringae pv. syringae B728a

    ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module
    SEED: ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD
    KEGG: DNA ligase (ATP)

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_1960 Non-ribosomal peptide synthase:Amino acid adenylation no 0.44
    2 Psyr_2679 Binding-protein-dependent transport systems inner membrane component no 0.38
    3 Psyr_4427 amino acid/amide ABC transporter membrane protein 1, HAAT family no 0.38
    4 Psyr_2778 Phage minor tail protein L no 0.38
    5 Psyr_3024 Peptidase M14, carboxypeptidase A no 0.38
    6 Psyr_3977 Urea amidolyase-related protein no 0.37
    7 Psyr_0588 Transglutaminase-like protein no 0.37
    8 Psyr_4672 Coenzyme PQQ synthesis C no 0.37
    9 Psyr_3684 NLP/P60 no 0.37
    10 Psyr_2741 Beta-lactamase no 0.37
    11 Psyr_3503 conserved hypothetical protein no 0.36
    12 Psyr_1988 2-keto-3-deoxy-phosphogalactonate aldolase no 0.36
    13 Psyr_3230 Glycosyl transferase, group 1 no 0.36
    14 Psyr_4573 Histidine triad (HIT) protein no 0.35
    15 Psyr_3511 Response regulator receiver:Transcriptional regulatory protein, C-terminal 0.17 0.35
    16 Psyr_3483 Cyanase no 0.35
    17 Psyr_2073 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase no 0.35
    18 Psyr_2746 L-lysine 6-monooxygenase, putative 0.50 0.34
    19 Psyr_4175 Transport-associated protein no 0.34
    20 Psyr_2117 conserved hypothetical protein no 0.34

    Or look for negative cofitness