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  • Top cofit genes for Psyr_3212 from Pseudomonas syringae pv. syringae B728a

    Response regulator receiver:Transcriptional regulatory protein, C-terminal
    SEED: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_4130 Peptidase S1, chymotrypsin:PDZ/DHR/GLGF 0.40 0.73
    2 Psyr_3958 RNA polymerase, sigma-24 subunit, RpoE 0.45 0.69
    3 Psyr_0219 phosphomannomutase 0.74 0.67
    4 Psyr_1055 Membrane bound O-acyl transferase, MBOAT 0.50 0.67
    5 Psyr_1058 Parallel beta-helix repeat:Carbohydrate binding and sugar hydrolysis 0.25 0.67
    6 Psyr_1063 GDP-mannose 6-dehydrogenase no 0.67
    7 Psyr_1059 alginate export porin 0.54 0.67
    8 Psyr_1053 alginate biosynthesis protein AlgF 0.68 0.65
    9 Psyr_1057 alginate biosynthesis protein AlgX no 0.64
    10 Psyr_1206 type III secretion protein HrcT no 0.63
    11 Psyr_1060 Sel1-like repeat protein no 0.62
    12 Psyr_1054 alginate biosynthesis protein AlgJ no 0.61
    13 Psyr_1205 type III secretion protein HrcU no 0.61
    14 Psyr_1625 2-oxo-acid dehydrogenase E1 component homodimeric type 0.50 0.60
    15 Psyr_1200 outer-membrane type III secretion protein HrcC no 0.60
    16 Psyr_1062 alginate biosynthesis protein Alg8 0.46 0.60
    17 Psyr_4919 type III effector protein AvrPto1 no 0.60
    18 Psyr_1218 type III helper protein HrpK1 no 0.60
    19 Psyr_1061 alginate biosynthesis protein Alg44 no 0.59
    20 Psyr_1213 type III secretion cytoplasmic ATPase HrcN 0.41 0.59

    Or look for negative cofitness