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  • Top cofit genes for Psyr_3188 from Pseudomonas syringae pv. syringae B728a

    transcriptional regulator, LysR family
    SEED: Transcriptional regulator

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_2222 aminomethyltransferase 0.29 0.46
    2 Psyr_2843 C-5 cytosine-specific DNA methylase no 0.45
    3 Psyr_4026 Protein of unknown function DUF58 no 0.43
    4 Psyr_0756 indole-3-glycerol phosphate synthase 0.40 0.43
    5 Psyr_1304 CheW-like protein no 0.42
    6 Psyr_1539 Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer no 0.41
    7 Psyr_3372 conserved hypothetical protein no 0.41
    8 Psyr_2281 GGDEF domain protein no 0.40
    9 Psyr_3291 hypothetical protein no 0.40
    10 Psyr_1799 Protein of unknown function DUF6 no 0.40
    11 Psyr_3774 PAS no 0.39
    12 Psyr_3357 transcriptional regulator, LysR family no 0.39
    13 Psyr_1162 conserved hypothetical protein no 0.39
    14 Psyr_1518 putative exported protein no 0.39
    15 Psyr_1808 conserved hypothetical protein no 0.39
    16 Psyr_2789 conserved hypothetical protein no 0.39
    17 Psyr_4298 Protein of unknown function DUF6 0.43 0.39
    18 Psyr_2777 NLP/P60 no 0.39
    19 Psyr_1528 Arc-like DNA binding protein no 0.37
    20 Psyr_3618 Catalytic LigB subunit of aromatic ring-opening dioxygenase no 0.37

    Or look for negative cofitness