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  • Top cofit genes for Psyr_3163 from Pseudomonas syringae pv. syringae B728a

    epralysin, Metallo peptidase, MEROPS family M10B
    SEED: Secreted alkaline metalloproteinase (EC 3.4.24.-), PrtA/B/C/G homolog
    KEGG: serralysin

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_3159 Type I secretion outer membrane protein, TolC 0.39 0.55
    2 Psyr_1299 NADH:flavin oxidoreductase/NADH oxidase no 0.43
    3 Psyr_0368 lipoprotein Blc no 0.40
    4 Psyr_3161 Type I secretion system ATPase, PrtD 0.65 0.39
    5 Psyr_1784 TonB-dependent siderophore receptor no 0.38
    6 Psyr_0509 PAS:GGDEF 0.25 0.37
    7 Psyr_3223 Glycosyl transferase, family 2 no 0.37
    8 Psyr_0769 conserved hypothetical membrane-anchored protein no 0.36
    9 Psyr_4272 Protein of unknown function DUF466 no 0.36
    10 Psyr_3160 Type I secretion membrane fusion protein, HlyD no 0.36
    11 Psyr_0363 conserved hypothetical protein no 0.34
    12 Psyr_4812 sorbitol-binding protein / mannitol-binding protein no 0.33
    13 Psyr_4651 S-type Pyocin no 0.32
    14 Psyr_1367 Zinc-containing alcohol dehydrogenase superfamily no 0.32
    15 Psyr_2909 DEAD_2 0.33 0.32
    16 Psyr_2758 ABC transporter:TOBE no 0.31
    17 Psyr_3518 hypothetical protein no 0.31
    18 Psyr_3266 Oxidoreductase, N-terminal:Oxidoreductase, C-terminal no 0.31
    19 Psyr_3253 multisubunit potassium/proton antiporter, PhaC subunit 0.31 0.30
    20 Psyr_2297 glucose 1-dehydrogenase no 0.30

    Or look for negative cofitness