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  • Top cofit genes for Psyr_3161 from Pseudomonas syringae pv. syringae B728a

    Type I secretion system ATPase, PrtD
    SEED: ABC-type protease exporter, ATP-binding component PrtD/AprD
    KEGG: ATP-binding cassette, subfamily C, bacterial HasD

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_1776 Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer no 0.47
    2 Psyr_4508 Endo-1,4-beta-xylanase no 0.44
    3 Psyr_2543 conserved hypothetical protein 0.19 0.42
    4 Psyr_4245 hypothetical protein no 0.42
    5 Psyr_2616 Amino acid adenylation no 0.41
    6 Psyr_2583 diaminobutyrate aminotransferase apoenzyme 0.38 0.41
    7 Psyr_1126 Heavy metal sensor kinase no 0.40
    8 Psyr_2621 Secretion protein HlyD no 0.39
    9 Psyr_3221 DegT/DnrJ/EryC1/StrS aminotransferase no 0.39
    10 Psyr_3163 epralysin, Metallo peptidase, MEROPS family M10B 0.65 0.39
    11 Psyr_2615 Amino acid adenylation no 0.39
    12 Psyr_2614 Amino acid adenylation no 0.38
    13 Psyr_1608 ice-nucleation proteins octamer repeat protein no 0.37
    14 Psyr_1190 type III transcriptional regulator HrpR no 0.37
    15 Psyr_1218 type III helper protein HrpK1 no 0.37
    16 Psyr_4580 anthranilate phosphoribosyltransferase 0.26 0.36
    17 Psyr_3554 Carbon storage regulator no 0.36
    18 Psyr_3253 multisubunit potassium/proton antiporter, PhaC subunit no 0.35
    19 Psyr_1602 ABC transporter 0.39 0.35
    20 Psyr_2130 4-hydroxyphenylpyruvate dioxygenase 0.39 0.35

    Or look for negative cofitness