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  • Top cofit genes for Psyr_3149 from Pseudomonas syringae pv. syringae B728a

    General secretion pathway protein G
    SEED: General secretion pathway protein G
    KEGG: general secretion pathway protein G

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_1889 type III effector HopH1 0.42 0.40
    2 Psyr_1549 lipoprotein, putative 0.56 0.39
    3 Psyr_0720 Fimbrial protein pilin 0.23 0.38
    4 Psyr_5082 Band 7 protein no 0.37
    5 Psyr_2143 delta1-piperideine 2-carboxylate reductase 0.70 0.36
    6 Psyr_2511 UvrD/REP helicase 0.53 0.35
    7 Psyr_2348 hypothetical protein no 0.35
    8 Psyr_4752 Insulinase-like:Peptidase M16, C-terminal 0.45 0.35
    9 Psyr_2579 Aldehyde dehydrogenase no 0.35
    10 Psyr_3086 Sulfate transporter/antisigma-factor antagonist STAS:Sulphate transporter no 0.35
    11 Psyr_1540 hypothetical protein no 0.34
    12 Psyr_1477 conserved domain protein no 0.33
    13 Psyr_4996 hypothetical protein no 0.33
    14 Psyr_0453 16S rRNA m(3)U-1498 methyltransferase 0.52 0.32
    15 Psyr_0716 type IV pilus assembly protein PilV 0.39 0.32
    16 Psyr_4829 Substrate-binding region of ABC-type glycine betaine transport system no 0.32
    17 Psyr_1461 hypothetical protein no 0.32
    18 Psyr_4702 Cyclic nucleotide-binding:CBS:Putative nucleotidyltransferase DUF294 0.61 0.32
    19 Psyr_0115 membrane protein, putative 0.19 0.32
    20 Psyr_4307 Protein of unknown function DUF142 no 0.31

    Or look for negative cofitness