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  • Top cofit genes for Psyr_3144 from Pseudomonas syringae pv. syringae B728a

    Fimbrial assembly
    SEED: General secretion pathway protein L
    KEGG: general secretion pathway protein L

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_4883 Glutaredoxin no 0.54
    2 Psyr_1057 alginate biosynthesis protein AlgX no 0.48
    3 Psyr_0320 Protein of unknown function UPF0149 no 0.46
    4 Psyr_2967 Secretion protein HlyD no 0.44
    5 Psyr_1056 Poly(beta-D-mannuronate) lyase no 0.44
    6 Psyr_1422 Protein of unknown function DUF1528:Relaxase no 0.43
    7 Psyr_1189 SLT:MLTD_N no 0.43
    8 Psyr_3141 type II and III secretion system protein:NolW-like protein 0.95 0.42
    9 Psyr_0167 hypothetical protein no 0.42
    10 Psyr_0088 PAS:GGDEF no 0.41
    11 Psyr_2054 Protein of unknown function DUF58 no 0.41
    12 Psyr_0929 Glycosyl transferase, family 2 no 0.41
    13 Psyr_0094 hypothetical protein no 0.41
    14 Psyr_2524 conserved hypothetical protein no 0.40
    15 Psyr_3794 surface antigen (D15):Surface antigen variable number no 0.40
    16 Psyr_3184 ATP-dependent Clp protease adaptor protein ClpS 0.81 0.40
    17 Psyr_3596 Selenoprotein W-related protein no 0.40
    18 Psyr_2745 Pyridoxal-5'-phosphate-dependent enzyme, beta subunit:Ornithine cyclodeaminase/mu-crystallin no 0.40
    19 Psyr_2537 conserved hypothetical protein no 0.40
    20 Psyr_2364 conserved hypothetical protein 0.51 0.40

    Or look for negative cofitness