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  • Top cofit genes for Psyr_3112 from Pseudomonas syringae pv. syringae B728a

    Putative ammonia monooxygenase
    SEED: Putative transport protein

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_2913 transcriptional regulator, LysR family no 0.41
    2 Psyr_2402 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II no 0.41
    3 Psyr_1030 bacteriophage N4 adsorption protein B no 0.39
    4 Psyr_4277 Oxidoreductase FAD/NAD(P)-binding:Oxidoreductase FAD-binding region no 0.39
    5 Psyr_2989 6-phosphogluconate dehydrogenase (decarboxylating) no 0.38
    6 Psyr_3046 Protein of unknown function DUF330 no 0.38
    7 Psyr_4912 amino acid ABC transporter substrate-binding protein, PAAT family 0.41 0.38
    8 Psyr_2967 Secretion protein HlyD 0.49 0.37
    9 Psyr_3043 Paraquat-inducible protein A no 0.37
    10 Psyr_2767 Glycoside hydrolase, family 19 no 0.35
    11 Psyr_4144 Protein of unknown function DUF1239 no 0.35
    12 Psyr_0603 N-acylglucosamine 2-epimerase no 0.34
    13 Psyr_3756 Na+/solute symporter no 0.33
    14 Psyr_2077 regulatory protein, LysR:LysR, substrate-binding protein 0.18 0.33
    15 Psyr_4178 tRNA pseudouridine synthase B 0.53 0.32
    16 Psyr_0320 Protein of unknown function UPF0149 0.64 0.31
    17 Psyr_2591 transport system permease protein no 0.31
    18 Psyr_4061 imelysin, Metallo peptidase, MEROPS family M75 no 0.31
    19 Psyr_0393 Protein of unknown function DUF971 no 0.31
    20 Psyr_4139 Mce4/Rv3499c/MTV023.06c protein no 0.31

    Or look for negative cofitness