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  • Top cofit genes for Psyr_2944 from Pseudomonas syringae pv. syringae B728a

    amino acid ABC transporter membrane protein 1, PAAT family
    SEED: Glutamate transport membrane-spanning protein
    KEGG: polar amino acid transport system permease protein

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_1020 GTP cyclohydrolase I no 0.46
    2 Psyr_4493 PAS:GGDEF 0.38 0.42
    3 Psyr_2869 xenobiotic compound monooxygenase, DszA family no 0.39
    4 Psyr_4956 protein of unknown function DUF879 0.60 0.37
    5 Psyr_2873 Acyl-CoA dehydrogenase, C-terminal no 0.37
    6 Psyr_4310 hypothetical protein no 0.37
    7 Psyr_2179 General substrate transporter:Major facilitator superfamily no 0.37
    8 Psyr_1179 Oligopeptide transporter OPT superfamily no 0.36
    9 Psyr_2061 SLT no 0.36
    10 Psyr_0112 hypothetical protein no 0.35
    11 Psyr_0723 Sensor protein PilS no 0.35
    12 Psyr_1073 amino acid ABC transporter membrane protein 1, PAAT family no 0.35
    13 Psyr_4339 ATP-binding region, ATPase-like:Histidine kinase A, N-terminal:Histidine kinase:Histidine kinase 0.33 0.35
    14 Psyr_3073 transcriptional regulator, LysR family no 0.34
    15 Psyr_2206 amino acid/amide ABC transporter substrate-binding protein, HAAT family no 0.34
    16 Psyr_2582 TonB-dependent siderophore receptor no 0.34
    17 Psyr_0471 coproporphyrinogen III oxidase, anaerobic no 0.34
    18 Psyr_1368 Carboxylesterase no 0.34
    19 Psyr_1015 Protein of unknown function DUF540 no 0.34
    20 Psyr_2511 UvrD/REP helicase no 0.33

    Or look for negative cofitness