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  • Top cofit genes for Psyr_2915 from Pseudomonas syringae pv. syringae B728a

    transcriptional regulator, AraC family with amidase-like domain protein
    SEED: Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_0419 conserved hypothetical protein no 0.51
    2 Psyr_4504 carbohydrate ABC transporter membrane protein 2, CUT1 family no 0.48
    3 Psyr_3494 hypothetical protein no 0.46
    4 Psyr_2055 Transglutaminase-like protein 0.36 0.45
    5 Psyr_1673 transcriptional regulator, AraC family no 0.43
    6 Psyr_0357 Diaminopimelate ABC transporter membrane protein / L-cystine ABC transporter membrane protein no 0.43
    7 Psyr_0783 MCP methyltransferase, CheR-type no 0.42
    8 Psyr_2491 glycogen branching enzyme 0.24 0.42
    9 Psyr_0141 Binding-protein-dependent transport systems inner membrane component no 0.41
    10 Psyr_2369 aldose 1-epimerase 0.53 0.40
    11 Psyr_1272 NUDIX hydrolase no 0.40
    12 Psyr_2906 Pilus retraction protein PilT no 0.40
    13 Psyr_2661 conserved hypothetical protein 0.42 0.40
    14 Psyr_4478 Alpha/beta hydrolase fold protein 0.26 0.40
    15 Psyr_3130 Secretion protein HlyD no 0.39
    16 Psyr_4489 putative cytoplasmic protein no 0.39
    17 Psyr_2501 Hemerythrin no 0.39
    18 Psyr_1324 conserved hypothetical protein 0.47 0.39
    19 Psyr_1081 conserved hypothetical protein no 0.39
    20 Psyr_3830 3-oxoacyl-[acyl-carrier protein] synthase no 0.39

    Or look for negative cofitness