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  • Top cofit genes for Psyr_2898 from Pseudomonas syringae pv. syringae B728a

    Helix-turn-helix motif protein
    SEED: Transcriptional regulator, Cro/CI family

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_3740 Protein of unknown function DUF454 no 0.44
    2 Psyr_1371 5'-nucleotidase / exopolyphosphatase / 3'-nucleotidase no 0.42
    3 Psyr_2326 lipoprotein, putative no 0.40
    4 Psyr_3054 Choline/ethanolamine kinase:Aminoglycoside phosphotransferase 0.45 0.40
    5 Psyr_1555 Cobyrinic acid a,c-diamide synthase no 0.39
    6 Psyr_0863 PhnA protein no 0.39
    7 Psyr_0750 conserved hypothetical protein 0.46 0.38
    8 Psyr_3134 General substrate transporter:Major facilitator superfamily 0.29 0.37
    9 Psyr_0255 glutamate-cysteine ligase no 0.36
    10 Psyr_4258 conserved hypothetical protein no 0.36
    11 Psyr_1101 Helix-turn-helix, Fis-type no 0.36
    12 Psyr_1227 Queuosine biosynthesis protein no 0.35
    13 Psyr_4287 tRNA (uracil-5-)-methyltransferase no 0.35
    14 Psyr_4955 Protein of unknown function DUF1316 no 0.35
    15 Psyr_0648 transporter, putative no 0.35
    16 Psyr_2118 protein of unknown function DUF883 no 0.34
    17 Psyr_3089 Hemolysin-type calcium-binding region:hemolysin-type calcium binding related protein 0.51 0.34
    18 Psyr_0196 conserved hypothetical protein 0.44 0.34
    19 Psyr_3728 hypothetical protein no 0.34
    20 Psyr_2065 transcription elongation factor GreB no 0.34

    Or look for negative cofitness