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  • Top cofit genes for Psyr_2882 from Pseudomonas syringae pv. syringae B728a

    transcriptional regulator, AraC family
    SEED: Xylose activator XylR (AraC family)
    KEGG: LacI family transcriptional regulator

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_0753 Protein of unknown function DUF187 no 0.37
    2 Psyr_0715 pillin, putative no 0.35
    3 Psyr_4252 Binding-protein-dependent transport systems inner membrane component no 0.34
    4 Psyr_0078 Beta-lactamase-like protein no 0.34
    5 Psyr_4291 hypothetical protein no 0.30
    6 Psyr_1672 L-threonine ammonia-lyase 0.29 0.29
    7 Psyr_0314 Flagellar basal body-associated protein FliL no 0.29
    8 Psyr_3436 Response regulator receiver 0.40 0.29
    9 Psyr_3433 Protein-glutamate methylesterase no 0.29
    10 Psyr_1005 OmpA/MotB 0.50 0.28
    11 Psyr_0717 type IV pilus assembly protein PilW no 0.28
    12 Psyr_4448 Ferritin and Dps no 0.28
    13 Psyr_2909 DEAD_2 no 0.28
    14 Psyr_0120 Short-chain dehydrogenase/reductase SDR no 0.27
    15 Psyr_1714 exonuclease SbcC 0.12 0.27
    16 Psyr_2711 diguanylate cyclase/phosphodiesterase no 0.27
    17 Psyr_1157 diguanylate cyclase with PAS/PAC sensor no 0.27
    18 Psyr_0716 type IV pilus assembly protein PilV no 0.26
    19 Psyr_1874 Mg2+ transporter protein, CorA-like protein no 0.26
    20 Psyr_1633 MotA/TolQ/ExbB proton channel no 0.26

    Or look for negative cofitness