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  • Top cofit genes for Psyr_2865 from Pseudomonas syringae pv. syringae B728a

    Hydrophobe/amphiphile efflux-1 HAE1
    SEED: RND efflux system, inner membrane transporter CmeB
    KEGG: hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_2952 NADP oxidoreductase, coenzyme F420-dependent no 0.52
    2 Psyr_3103 phosphate ABC transporter ATP-binding protein, PhoT family no 0.49
    3 Psyr_2524 conserved hypothetical protein no 0.47
    4 Psyr_2741 Beta-lactamase no 0.47
    5 Psyr_2905 ABC transporter no 0.47
    6 Psyr_2124 Benzoate transport no 0.46
    7 Psyr_1708 L-arabinonate dehydratase no 0.46
    8 Psyr_1792 Amino acid adenylation no 0.46
    9 Psyr_2686 carbamate kinase 0.13 0.46
    10 Psyr_2681 gamma-glutamyltransferase 2, Threonine peptidase, MEROPS family T03 0.39 0.45
    11 Psyr_1608 ice-nucleation proteins octamer repeat protein no 0.45
    12 Psyr_2743 Lysine exporter protein (LYSE/YGGA) no 0.44
    13 Psyr_1511 type II secretion system protein E no 0.44
    14 Psyr_3676 adenosylcobyric acid synthase (glutamine-hydrolysing) no 0.44
    15 Psyr_1755 ABC transporter no 0.44
    16 Psyr_0247 glycine cleavage system H protein no 0.43
    17 Psyr_2720 Urea amidolyase-related protein no 0.43
    18 Psyr_2364 conserved hypothetical protein no 0.43
    19 Psyr_0754 Levansucrase no 0.43
    20 Psyr_0835 transcriptional regulator, TraR/DksA family no 0.43

    Or look for negative cofitness