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  • Top cofit genes for Psyr_2807 from Pseudomonas syringae pv. syringae B728a

    NinB
    SEED: Phage NinB DNA recombination

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_0899 Tripartite ATP-independent periplasmic transporter, DctQ component no 0.49
    2 Psyr_1776 Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer 0.35 0.43
    3 Psyr_3264 monosaccharide ABC transporter ATP-binding protein, CUT2 family no 0.42
    4 Psyr_5009 conserved hypothetical protein no 0.41
    5 Psyr_1663 phosphoribosylanthranilate isomerase no 0.39
    6 Psyr_3131 Secretion protein HlyD no 0.39
    7 Psyr_4580 anthranilate phosphoribosyltransferase no 0.39
    8 Psyr_2275 glutamate synthase (NADPH) GltB3 subunit no 0.38
    9 Psyr_3618 Catalytic LigB subunit of aromatic ring-opening dioxygenase no 0.37
    10 Psyr_2219 transcriptional regulator, LysR family no 0.37
    11 Psyr_3227 Glycosyl transferase, family 2 no 0.36
    12 Psyr_3221 DegT/DnrJ/EryC1/StrS aminotransferase no 0.36
    13 Psyr_2442 precorrin-6A synthase (deacetylating) no 0.35
    14 Psyr_4508 Endo-1,4-beta-xylanase no 0.35
    15 Psyr_3336 transcriptional regulator, LacI family no 0.34
    16 Psyr_4026 Protein of unknown function DUF58 no 0.34
    17 Psyr_1944 Thioesterase no 0.34
    18 Psyr_3161 Type I secretion system ATPase, PrtD no 0.33
    19 Psyr_4997 YD repeat protein no 0.33
    20 Psyr_5011 Amino acid adenylation:Thioester reductase no 0.33

    Or look for negative cofitness