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Cofit
Protein
Homologs
Top cofit genes for Psyr_2807 from
Pseudomonas syringae pv. syringae B728a
NinB
SEED: Phage NinB DNA recombination
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Psyr
_0899
Tripartite ATP-independent periplasmic transporter, DctQ component
no
0.49
2
Psyr
_1776
Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer
0.35
0.43
3
Psyr
_3264
monosaccharide ABC transporter ATP-binding protein, CUT2 family
no
0.42
4
Psyr
_5009
conserved hypothetical protein
no
0.41
5
Psyr
_1663
phosphoribosylanthranilate isomerase
no
0.39
6
Psyr
_3131
Secretion protein HlyD
no
0.39
7
Psyr
_4580
anthranilate phosphoribosyltransferase
no
0.39
8
Psyr
_2275
glutamate synthase (NADPH) GltB3 subunit
no
0.38
9
Psyr
_3618
Catalytic LigB subunit of aromatic ring-opening dioxygenase
no
0.37
10
Psyr
_2219
transcriptional regulator, LysR family
no
0.37
11
Psyr
_3227
Glycosyl transferase, family 2
no
0.36
12
Psyr
_3221
DegT/DnrJ/EryC1/StrS aminotransferase
no
0.36
13
Psyr
_2442
precorrin-6A synthase (deacetylating)
no
0.35
14
Psyr
_4508
Endo-1,4-beta-xylanase
no
0.35
15
Psyr
_3336
transcriptional regulator, LacI family
no
0.34
16
Psyr
_4026
Protein of unknown function DUF58
no
0.34
17
Psyr
_1944
Thioesterase
no
0.34
18
Psyr
_3161
Type I secretion system ATPase, PrtD
no
0.33
19
Psyr
_4997
YD repeat protein
no
0.33
20
Psyr
_5011
Amino acid adenylation:Thioester reductase
no
0.33
Or look for
negative cofitness