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  • Top cofit genes for Psyr_2711 from Pseudomonas syringae pv. syringae B728a

    diguanylate cyclase/phosphodiesterase
    SEED: diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_1816 transcriptional regulator, GntR family no 0.42
    2 Psyr_3873 ATP-dependent DNA ligase:ATP-dependent DNA ligase no 0.40
    3 Psyr_2952 NADP oxidoreductase, coenzyme F420-dependent 0.20 0.37
    4 Psyr_4586 tail protein, putative no 0.37
    5 Psyr_3097 Peptidase U32 0.48 0.36
    6 Psyr_1235 serine O-acetyltransferase no 0.36
    7 Psyr_0115 membrane protein, putative no 0.34
    8 Psyr_3087 transcriptional regulator, GntR family no 0.34
    9 Psyr_3945 secreted protein-like protein no 0.33
    10 Psyr_0627 Ethanolamine ammonia-lyase light chain no 0.33
    11 Psyr_2361 DNA damage-inducible DNA polymerase II no 0.33
    12 Psyr_0088 PAS:GGDEF no 0.33
    13 Psyr_1587 Bile acid:sodium symporter no 0.33
    14 Psyr_3241 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region:D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein no 0.33
    15 Psyr_0290 ThiJ/PfpI no 0.33
    16 Psyr_0672 nucleoside ABC transporter membrane protein no 0.32
    17 Psyr_3749 Peptidase M42 no 0.32
    18 Psyr_1405 hypothetical protein no 0.32
    19 Psyr_1610 ribosomal large subunit pseudouridine synthase A no 0.32
    20 Psyr_1674 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase no 0.31

    Or look for negative cofitness